Cross-tier application and data partitioning of web applications for hybrid cloud deployment

Hybrid cloud deployment offers flexibility in trade-offs between the cost-savings/scalability of the public cloud and control over data resources provided at a private premise. However, this flexibility comes at the expense of complexity in distributing a system over these two locations. For multi-tier web applications, this challenge manifests itself primarily in the partitioning of application- and database-tiers. While there is existing research that focuses on either application-tier or data-tier partitioning, we show that optimized partitioning of web applications benefits from both tiers being considered simultaneously. We present our research on a new cross-tier partitioning approach to help developers make effective trade-offs between performance and cost in a hybrid cloud deployment. In two case studies the approach results in up to 54% reduction in monetary costs compared to a premise only deployment and 56% improvement in execution time compared to a naïve partitioning where application-tier is deployed in the cloud and data-tier is on private infrastructure

Genome modeling system: A knowledge management platform for genomics

In this work, we present the Genome Modeling System (GMS), an analysis information management system capable of executing automated genome analysis pipelines at a massive scale. The GMS framework provides detailed tracking of samples and data coupled with reliable and repeatable analysis pipelines. The GMS also serves as a platform for bioinformatics development, allowing a large team to collaborate on data analysis, or an individual researcher to leverage the work of others effectively within its data management system. Rather than separating ad-hoc analysis from rigorous, reproducible pipelines, the GMS promotes systematic integration between the two. As a demonstration of the GMS, we performed an integrated analysis of whole genome, exome and transcriptome sequencing data from a breast cancer cell line (HCC1395) and matched lymphoblastoid line (HCC1395BL). These data are available for users to test the software, complete tutorials and develop novel GMS pipeline configurations. The GMS is available at https://github.com/genome/gms

MANTICORE:a framework for partitioning software services for hybrid cloud

Hybrid cloud deployment can be an attractive option for companies wanting to deploy software services on scalable public clouds, while still assuming local control over sensitive data resources. A hybrid deployment, despite providing better control, is difficult to design since code must be partitioned and distributed efficiently between public and private premises. This paper describes our research into automated partitioning of software services for hybrid clouds. We have identified two specific shortfalls of existing partitioning research which are important to a hybrid cloud setting: (i) inflexibility in placement of software function execution between public/private hosts and (ii) no support for making explicit tradeoffs between monetary cost and performance. We propose a new software profiling and partitioning framework (called MANTICORE) which addresses these problems. Experiments on an open-source Web application show that the new approach ensures better performance without increasing costs

Aspect-Oriented Development of Distributed Object Applications By

It it is often useful to distinguish between the definition of a core software system and features that may apply to it. A feature is an optional extension of the original system. Systems need to be adapted in order to take on new features. Distributed heterogeneous software is particularly hard to adapt for deployment in disparate exe-cution environments. We introduce the concept of an adaptation service to coordinate crosscutting modifications to standard program components, transparently. This is achieved through Aspect-Oriented Programming. A service is made up of client-and server-side components called adaptlets. At run-time a protocol, GlueQoS, can be used to determine what adaptlets are activated. The goal is to reduce devel-opment costs associated with middleware application maintenance and deployment

Doxpects: aspects supporting xml transformation interfaces

In the web services environment software development can involve writing both object-oriented programs and XML transformations. This can be seen in the popular Web Services architecture. In this architecture, crosscutting concerns are often manifest as transformations on XML messages; encrypting messages, adapting between schemas types or adding extrafunctional elements such as transaction contexts can be seen as prime examples. Some existing middleware platforms provide support for Handlers where crosscutting message transformation concerns can be addressed. Although handlers localize some concerns, they do not support the sound software-engineering principle of “programming to an interface”. This prevents a clean mapping from design to implementation and inhibits useful static checking which could take advantage of a well specified interface. To address this and similar design challenges, we have developed Doxpects, which solve many problems with the existing handler approach to implementing these new crosscutting concerns. We describe an AOP abstraction called the content-based pointcut which integrates support for XML transformation to enable implementation of crosscutting concerns with good modularity properties. We present examples based on XML encryption and service interoperability implemented on top of the Apache Axis Web Services middleware

Interface Composition for Web Service Intermediaries

Abstract. The use of XML as a format for message exchange makes Web services well suited for composition of heterogeneous components. However, since clients must manage differences in message schemas between services, interoperability is still a significant problem. Interoperability currently can be supported through the use of transformations provided by a Web service intermediary. However, intermediary technologies do not provide a way for clients to reason about the composition of services and intermediaries. We propose an approach to provide clients with an interface composed of schema information from a Web service and an intermediary. Composition is performed by applying rewriting rules, defined by the intermediary, to the server interface schema. This new interface takes into account what transformations are available at an intermediary. The advantage of the approach is that clients can continue to benefit from codegeneration and static type-checking offered by interface definition languages such as WSDL; while still making use of the flexibility offered by intermediary transformations. We provide the algorithmic details of composition, including a proof of correctness and an upper bound on complexity. We demonstrate the approach in the context of a Web service composition of three publicly available Web services.